Cropping system history and crop rotation phase drive the abundance of soil denitrification genes nirK, nirS and nosZ in conventional and organic grain agroecosystems

Type de document
journalArticle
Langue source
-- Langue source --
Titre
Cropping system history and crop rotation phase drive the abundance of soil denitrification genes nirK, nirS and nosZ in conventional and organic grain agroecosystems
Titre français
Titre anglais
Auteur(s)
  • MAUL Jude E.
  • CAVIGELLI Michel A.
  • VINYARD Bryan
  • BUYER Jeffrey S.
Editeur(s)
Autre(s)
Id
YDB2W89G
Version
2790
Date ajout
12 mars 2021 19:55
Date modification
12 mars 2021 19:55
Résumé
While nitrogen fertilizers have helped increase crop yields substantially, they have also contributed to several environmental problems, including an increasing atmospheric concentration of nitrous oxide (N2O), a greenhouse gas (GHG) and catalyst of stratospheric ozone decay. The dominant source of atmospheric N2O in many agricultural soils is denitrification, a process carried out by soil microbes containing the genes for nitrate reductase (Nar), nitrite reductase (Nir), nitric oxide reductase (Nor) and/or nitrous oxide reductase (Nos). We monitored the abundance of soil nirK, nirS, and nosZ genes during the summer growing season. We sampled replicated field plots from a long-term agricultural research site that includes agroecosystems with corn/soybean/wheat/legume rotations: two tilled-organic systems (Org3 and Org6), and two conventional systems, one using a chisel plow for primary tillage (CT) and one using no-tillage (NT). We demonstrate that nirK copy number in soil was affected primarily by the phase of the crop rotation and secondarily by time of year, regardless of cropping system. In contrast, nosZ gene copy number was primarily driven by cropping system. Soil N2O emissions during the sampling period were highest in Org3 and lowest in NT. However, gene quantities did not correspond to N2O emissions patterns, indicating that quantitative PCR of key denitrification genes measured at the temporal resolution reported here is not a good predictor of soil N2O emissions. These results, nonetheless, show that cropping system management can affect microbial community composition, gene quantity of nir and nos genes and N2O emissions. We found cropping system and time of year captured variation in gene abundance among microbial denitrifier populations in these agricultural soils.
Note
None
CRAW tags
  • AB - Modalité bio
  • FREDO biologie et travail du sol
  • FREDO rotation culturale
  • GEO Etats-Unis
WEB tags
  • 16s
  • agroecosystems
  • denitrification
  • microbial ecology
  • nir
  • nos
  • Quantitative PCR
  • soybean
  • wheat
Titre de la publication
Agriculture, Ecosystems & Environment
Volume
273
Pages
95-106
Date caractères
March 1, 2019
Date publication
1 mars 2019
Doi
10.1016/j.agee.2018.11.022 Le DOI est une URL unique de référencement d'une publication. Il est donc plus fiable et permanent qu'une URL classique
Issn
0167-8809 L’ISSN est un code de 8 chiffres servant à identifier les journaux, revues, magazines, périodiques de toute nature et sur tous supports, papier comme électronique.